Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer

This page lists links to the raw data for our Placenta paper. The mm9-based BAM and mHap files are provided.

RRBS

Condition	Name	BAM (mm9)	mHap (mm9)
2i	2i_1	2i_1.bam	2i_1.mhap.gz
2i	2i_2	2i_2.bam	2i_2.mhap.gz
2i	2i_3	2i_3.bam	2i_3.mhap.gz
2i	2i_4	2i_4.bam	2i_4.mhap.gz
Epi_Dnmt1	Epi_Dnmt1_1	Epi_Dnmt1_1.bam	Epi_Dnmt1_1.mhap.gz
Epi_Dnmt1	Epi_Dnmt1_2	Epi_Dnmt1_2.bam	Epi_Dnmt1_2.mhap.gz
Epi_Dnmt1	Epi_Dnmt1_3	Epi_Dnmt1_3.bam	Epi_Dnmt1_3.mhap.gz
Epi_Dnmt1	Epi_Dnmt1_4	Epi_Dnmt1_4.bam	Epi_Dnmt1_4.mhap.gz
Epi_Dnmt1	Epi_Dnmt1_5	Epi_Dnmt1_5.bam	Epi_Dnmt1_5.mhap.gz
Epi_Dnmt3a	Epi_Dnmt3a_1	Epi_Dnmt3a_1.bam	Epi_Dnmt3a_1.mhap.gz
Epi_Dnmt3a	Epi_Dnmt3a_2	Epi_Dnmt3a_2.bam	Epi_Dnmt3a_2.mhap.gz
Epi_Dnmt3a	Epi_Dnmt3a_4	Epi_Dnmt3a_4.bam	Epi_Dnmt3a_4.mhap.gz
Epi_Dnmt3a	Epi_Dnmt3a_5	Epi_Dnmt3a_5.bam	Epi_Dnmt3a_5.mhap.gz
Epi_Dnmt3a	Epi_Dnmt3a_6	Epi_Dnmt3a_6.bam	Epi_Dnmt3a_6.mhap.gz
Epi_Dnmt3b	Epi_Dnmt3b_1	Epi_Dnmt3b_1.bam	Epi_Dnmt3b_1.mhap.gz
Epi_Dnmt3b	Epi_Dnmt3b_2	Epi_Dnmt3b_2.bam	Epi_Dnmt3b_2.mhap.gz
Epi_Dnmt3b	Epi_Dnmt3b_3	Epi_Dnmt3b_3.bam	Epi_Dnmt3b_3.mhap.gz
Epi_Dnmt3b	Epi_Dnmt3b_4	Epi_Dnmt3b_4.bam	Epi_Dnmt3b_4.mhap.gz
Epi_Dnmt3b	Epi_Dnmt3b_5	Epi_Dnmt3b_5.bam	Epi_Dnmt3b_5.mhap.gz
Epi_Dnmt3b	Epi_Dnmt3b_6	Epi_Dnmt3b_6.bam	Epi_Dnmt3b_6.mhap.gz
Epi_Dnmt3l	Epi_Dnmt3l_1	Epi_Dnmt3l_1.bam	Epi_Dnmt3l_1.mhap.gz
Epi_Dnmt3l	Epi_Dnmt3l_2	Epi_Dnmt3l_2.bam	Epi_Dnmt3l_2.mhap.gz
Epi_Dnmt3l	Epi_Dnmt3l_3	Epi_Dnmt3l_3.bam	Epi_Dnmt3l_3.mhap.gz
Epi_Dnmt3l	Epi_Dnmt3l_4	Epi_Dnmt3l_4.bam	Epi_Dnmt3l_4.mhap.gz
Epi_Dnmt3l	Epi_Dnmt3l_5	Epi_Dnmt3l_5.bam	Epi_Dnmt3l_5.mhap.gz
Epi_EED	Epi_EED_1	Epi_EED_1.bam	Epi_EED_1.mhap.gz
Epi_EED	Epi_EED_2	Epi_EED_2.bam	Epi_EED_2.mhap.gz
Epi_EED	Epi_EED_3	Epi_EED_3.bam	Epi_EED_3.mhap.gz
Epi_EED	Epi_EED_8	Epi_EED_8.bam	Epi_EED_8.mhap.gz
Epi_Kdm2b_both	Epi_Kdm2b_both_1	Epi_Kdm2b_both_1.bam	Epi_Kdm2b_both_1.mhap.gz
Epi_Kdm2b_both	Epi_Kdm2b_both_3	Epi_Kdm2b_both_3.bam	Epi_Kdm2b_both_3.mhap.gz
Epi_Kdm2b_both	Epi_Kdm2b_both_4	Epi_Kdm2b_both_4.bam	Epi_Kdm2b_both_4.mhap.gz
Epi_WT	Epi_WT_4	Epi_WT_4.bam	Epi_WT_4.mhap.gz
Epi_WT	Epi_WT_5	Epi_WT_5.bam	Epi_WT_5.mhap.gz
Epi_WT	Epi_WT_6	Epi_WT_6.bam	Epi_WT_6.mhap.gz
Epi_WT	Epi_WT_7	Epi_WT_7.bam	Epi_WT_7.mhap.gz
ExE_Dnmt1	ExE_Dnmt1_1	ExE_Dnmt1_1.bam	ExE_Dnmt1_1.mhap.gz
ExE_Dnmt1	ExE_Dnmt1_2	ExE_Dnmt1_2.bam	ExE_Dnmt1_2.mhap.gz
ExE_Dnmt1	ExE_Dnmt1_3	ExE_Dnmt1_3.bam	ExE_Dnmt1_3.mhap.gz
ExE_Dnmt1	ExE_Dnmt1_4	ExE_Dnmt1_4.bam	ExE_Dnmt1_4.mhap.gz
ExE_Dnmt1	ExE_Dnmt1_5	ExE_Dnmt1_5.bam	ExE_Dnmt1_5.mhap.gz
ExE_Dnmt3a	ExE_Dnmt3a_1	ExE_Dnmt3a_1.bam	ExE_Dnmt3a_1.mhap.gz
ExE_Dnmt3a	ExE_Dnmt3a_4	ExE_Dnmt3a_4.bam	ExE_Dnmt3a_4.mhap.gz
ExE_Dnmt3a	ExE_Dnmt3a_5	ExE_Dnmt3a_5.bam	ExE_Dnmt3a_5.mhap.gz
ExE_Dnmt3a	ExE_Dnmt3a_6	ExE_Dnmt3a_6.bam	ExE_Dnmt3a_6.mhap.gz
ExE_Dnmt3b	ExE_Dnmt3b_1	ExE_Dnmt3b_1.bam	ExE_Dnmt3b_1.mhap.gz
ExE_Dnmt3b	ExE_Dnmt3b_2	ExE_Dnmt3b_2.bam	ExE_Dnmt3b_2.mhap.gz
ExE_Dnmt3b	ExE_Dnmt3b_3	ExE_Dnmt3b_3.bam	ExE_Dnmt3b_3.mhap.gz
ExE_Dnmt3b	ExE_Dnmt3b_4	ExE_Dnmt3b_4.bam	ExE_Dnmt3b_4.mhap.gz
ExE_Dnmt3b	ExE_Dnmt3b_5	ExE_Dnmt3b_5.bam	ExE_Dnmt3b_5.mhap.gz
ExE_Dnmt3b	ExE_Dnmt3b_6	ExE_Dnmt3b_6.bam	ExE_Dnmt3b_6.mhap.gz
ExE_Dnmt3l	ExE_Dnmt3l_1	ExE_Dnmt3l_1.bam	ExE_Dnmt3l_1.mhap.gz
ExE_Dnmt3l	ExE_Dnmt3l_2	ExE_Dnmt3l_2.bam	ExE_Dnmt3l_2.mhap.gz
ExE_Dnmt3l	ExE_Dnmt3l_4	ExE_Dnmt3l_4.bam	ExE_Dnmt3l_4.mhap.gz
ExE_Dnmt3l	ExE_Dnmt3l_5	ExE_Dnmt3l_5.bam	ExE_Dnmt3l_5.mhap.gz
ExE_EED	ExE_EED_1	ExE_EED_1.bam	ExE_EED_1.mhap.gz
ExE_EED	ExE_EED_2	ExE_EED_2.bam	ExE_EED_2.mhap.gz
ExE_EED	ExE_EED_3	ExE_EED_3.bam	ExE_EED_3.mhap.gz
ExE_EED	ExE_EED_8	ExE_EED_8.bam	ExE_EED_8.mhap.gz
ExE_Kdm2b_both	ExE_Kdm2b_both_1	ExE_Kdm2b_both_1.bam	ExE_Kdm2b_both_1.mhap.gz
ExE_Kdm2b_both	ExE_Kdm2b_both_3	ExE_Kdm2b_both_3.bam	ExE_Kdm2b_both_3.mhap.gz
ExE_Kdm2b_both	ExE_Kdm2b_both_4	ExE_Kdm2b_both_4.bam	ExE_Kdm2b_both_4.mhap.gz
ExE_WT	ExE_WT_4	ExE_WT_4.bam	ExE_WT_4.mhap.gz
ExE_WT	ExE_WT_5	ExE_WT_5.bam	ExE_WT_5.mhap.gz
ExE_WT	ExE_WT_6	ExE_WT_6.bam	ExE_WT_6.mhap.gz
ExE_WT	ExE_WT_7	ExE_WT_7.bam	ExE_WT_7.mhap.gz
FGF	FGF_1	FGF_1.bam	FGF_1.mhap.gz
FGF	FGF_4	FGF_4.bam	FGF_4.mhap.gz
FGF	FGF_5	FGF_5.bam	FGF_5.mhap.gz
FGF	FGF_7	FGF_7.bam	FGF_7.mhap.gz
FGF	FGF_8	FGF_8.bam	FGF_8.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_2	FGF_WNT_inside_2.bam	FGF_WNT_inside_2.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_3	FGF_WNT_inside_3.bam	FGF_WNT_inside_3.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_5	FGF_WNT_inside_5.bam	FGF_WNT_inside_5.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_6	FGF_WNT_inside_6.bam	FGF_WNT_inside_6.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_7	FGF_WNT_inside_7.bam	FGF_WNT_inside_7.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_8	FGF_WNT_inside_8.bam	FGF_WNT_inside_8.mhap.gz
FGF_WNT_inside	FGF_WNT_inside_9	FGF_WNT_inside_9.bam	FGF_WNT_inside_9.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_2	FGF_WNT_outside_2.bam	FGF_WNT_outside_2.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_3	FGF_WNT_outside_3.bam	FGF_WNT_outside_3.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_5	FGF_WNT_outside_5.bam	FGF_WNT_outside_5.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_6	FGF_WNT_outside_6.bam	FGF_WNT_outside_6.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_7	FGF_WNT_outside_7.bam	FGF_WNT_outside_7.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_8	FGF_WNT_outside_8.bam	FGF_WNT_outside_8.mhap.gz
FGF_WNT_outside	FGF_WNT_outside_9	FGF_WNT_outside_9.bam	FGF_WNT_outside_9.mhap.gz
PD	PD_1	PD_1.bam	PD_1.mhap.gz
PD	PD_2	PD_2.bam	PD_2.mhap.gz
PD	PD_3	PD_3.bam	PD_3.mhap.gz
PD	PD_4	PD_4.bam	PD_4.mhap.gz
PD	PD_5	PD_5.bam	PD_5.mhap.gz
PD	PD_6	PD_6.bam	PD_6.mhap.gz