Reproducible code

In this study, mHapSuite and mHapSc were developped by Yuyang Hong. Integrative data analysis was mainly performed by Zhiqiang Zhang.

Scripts

Figure Title Link
Figure1 Identification of DNA methylation haplotype blocks (MHBs) in cancers. Code
Figure2 Cancer MHBs are enriched in accessible chromatin regions. Code
Figure3 Cancer MHBs are associated with dysregulation of gene expression. Code
Figure4 Validation of cancer MHBs and their associated regulatory role using single-cell data. Code
Figure5 Cancer MHBs are associated with differentially expressed genes in pan-cancer. Code
Figure6 Characterizing DNA methylation inter-tumor heterogeneity in cancers. Code